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Summary of Inferring Stochastic Low-rank Recurrent Neural Networks From Neural Data, by Matthijs Pals et al.


Inferring stochastic low-rank recurrent neural networks from neural data

by Matthijs Pals, A Erdem Sağtekin, Felix Pei, Manuel Gloeckler, Jakob H Macke

First submitted to arxiv on: 24 Jun 2024

Categories

  • Main: Machine Learning (cs.LG)
  • Secondary: Neurons and Cognition (q-bio.NC); Machine Learning (stat.ML)

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Summary difficulty Written by Summary
High Paper authors High Difficulty Summary
Read the original abstract here
Medium GrooveSquid.com (original content) Medium Difficulty Summary
This research paper aims to develop models that relate neural activity to underlying dynamical systems in computational neuroscience. The goal is to create interpretable models that fit observed data well, using low-rank recurrent neural networks (RNNs) as a starting point. However, fitting these models to noisy observations of stochastic systems remains an open problem. To address this challenge, the authors propose fitting stochastic low-rank RNNs with variational sequential Monte Carlo methods. The proposed method is validated on several datasets featuring continuous and spiking neural data, achieving lower-dimensional latent dynamics than current state-of-the-art methods. Additionally, the authors show how to efficiently identify fixed points in large low-rank RNNs with piecewise linear nonlinearities, making analysis of inferred dynamics tractable.
Low GrooveSquid.com (original content) Low Difficulty Summary
This paper helps us understand how brain activity relates to underlying systems. The researchers want to create models that can explain what’s happening in the brain and fit well with real data. They use a type of neural network called low-rank RNNs, which are easier to understand than other types. However, it’s tricky to make these models work well when we only have noisy observations of the brain activity. To fix this problem, the authors suggest using a special method called variational sequential Monte Carlo methods. They test their idea on some datasets and show that it works better than current methods. This means we can understand the brain systems better and even generate new data that looks like real brain activity.

Keywords

* Artificial intelligence  * Neural network